March 2009 Archives by thread

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Starting: Sun Mar 1 09:22:20 PST 2009
Ending: Tue Mar 31 14:57:32 PST 2009
Messages: 124

• [phenixbb] default bondlengths - water   Engin Ozkan
  • [phenixbb] model completion after autobuild   James Whittle
    • [phenixbb] model completion after autobuild   Tom Terwilliger
• [phenixbb] Please help with neutron composite SA-omit   Imre Toeroe
  • [phenixbb] Please help with neutron composite SA-omit   Pavel Afonine
• [phenixbb] fwd: phenix.autobuild- multiple models.   Nathaniel Echols
  • [phenixbb] fwd: phenix.autobuild- multiple models.   Thomas C. Terwilliger
• [phenixbb] fwd: TLS without isotropic adp refinement   Nathaniel Echols
  • [phenixbb] fwd: TLS without isotropic adp refinement   Pavel Afonine
• [phenixbb] fwd: kicked maps   Pavel Afonine
• [phenixbb] refinement using a multiprocessor machine or on a cluster   Pavel Afonine
  • [phenixbb] refinement using a multiprocessor machine or on a cluster   Ralf W. Grosse-Kunstleve
• [phenixbb] PDF slides: introduction to refinement, phenix.refine and why automation is important (PHENIX)   Pavel Afonine
  • [phenixbb] PDF slides:   Mayer, Mark (NIH/NICHD) [E]
    • [phenixbb] PDF slides:   Pavel Afonine
• [phenixbb] phenixbb Digest, Vol 40, Issue 7   Pascal Egea
• [phenixbb] Restraints on water molecules   Engin Ozkan
  • [phenixbb] Restraints on water molecules   Pavel Afonine
    • [phenixbb] Restraints on water molecules   Engin Ozkan
      • [phenixbb] Restraints on water molecules   Pavel Afonine
• [phenixbb] ADP group definitions   Roeland Boer
  • [phenixbb] ADP group definitions   Pavel Afonine
  • [phenixbb] ADP group definitions   Pavel Afonine
• [phenixbb] installation : cctbx or cci apps   Bryan W. Lepore
  • [phenixbb] installation : cctbx or cci apps   Ralf W. Grosse-Kunstleve
• [phenixbb] RuntimeError: Not enough memory for cubicles:   Gino Cingolani
  • [phenixbb] RuntimeError: Not enough memory for cubicles:   Ralf W. Grosse-Kunstleve
• [phenixbb] Covalent ligands   cdas at purdue.edu
  • [phenixbb] Covalent ligands   Ralf W. Grosse-Kunstleve
  • [phenixbb] coordinate error   Maia Cherney
    • [phenixbb] coordinate error   Pavel Afonine
• [phenixbb] March 15, 2009 deadline- User proposal submission for Collaborative Crystallography at BCSB   Banumathi Sankaran
• [phenixbb] phenix.multi_crystal_average with twinned data   Mary Fitzgerald
• [phenixbb] phenix.multi_crystal_average with twinned data   Thomas C. Terwilliger
• [phenixbb] phenix.multi_crystal_average with twinned data   Thomas C. Terwilliger
• [phenixbb] Beamtime proposal deadline for ALS GU time   Peter Zwart
• [phenixbb] AutoBuild error: csh word too long   Zheng Zhou
  • [phenixbb] AutoBuild error: csh word too long   Thomas C. Terwilliger
• [phenixbb] refinement with a covalent inhibitor.   Maia Cherney
  • [phenixbb] refinement with a covalent inhibitor.   Ralf W. Grosse-Kunstleve
  • [phenixbb] refinement with a covalent inhibitor.   Sabine Schneider
    • [phenixbb] refinement with a covalent inhibitor.   Maia Cherney
      • [phenixbb] refinement with a covalent inhibitor.   Nigel W Moriarty
      • [phenixbb] refinement with a covalent inhibitor.   Maia Cherney
      • [phenixbb] refinement with a covalent inhibitor.   Nigel W Moriarty
      • [phenixbb] refinement with a covalent inhibitor.   Maia Cherney
      • [phenixbb] refinement with a covalent inhibitor.   Maia Cherney
      • [phenixbb] refinement with a covalent inhibitor.   Nigel W Moriarty
      • [phenixbb] refinement with a covalent inhibitor.   Maia Cherney
      • [phenixbb] refinement with a covalent inhibitor.   Maia Cherney
• [phenixbb] omit maps without density modification?   NATHAN THOMSEN
  • [phenixbb] omit maps without density modification?   Thomas C. Terwilliger
• [phenixbb] Can Phenix do MR with medium/low res EM models?   Gino Cingolani
  • [phenixbb] Can Phenix do MR with medium/low res EM models?   Edward A. Berry
• [phenixbb] Can Phenix do MR with medium/low res EM models?   Thomas C. Terwilliger
• [phenixbb] Problems with kicked maps in 1.4.3 or 1.4.4   Schubert, Carsten [PRDUS]
  • [phenixbb] Problems with kicked maps in 1.4.3 or 1.4.4   Pavel Afonine
    • [phenixbb] Problems with kicked maps in 1.4.3 or 1.4.4   Schubert, Carsten [PRDUS]
      • [phenixbb] Problems with kicked maps in 1.4.3 or 1.4.4   Pavel Afonine
• [phenixbb] IndexError   Huiying Li
  • [phenixbb] IndexError   Ralf W. Grosse-Kunstleve
• [phenixbb] Can Phenix do MR with medium/low res EM models?   Gino Cingolani
  • [phenixbb] Apologies-   Edward A. Berry
• [phenixbb] question about generating cif and pdb file using elbow   crystallogrphy
  • [phenixbb] question about generating cif and pdb file using elbow   Nigel W Moriarty
  • [phenixbb] question about generating cif and pdb file using elbow   Schubert, Carsten [PRDUS]
    • [phenixbb] question about generating cif and pdb file using elbow   junfeng liu
  • [phenixbb] question about generating cif and pdb file using elbow   Pavel Afonine
    • [phenixbb] after installation of phenix   Raja Dey
• [phenixbb] Problems with phasing a protein (1300aa)   Kumar
  • [phenixbb] Problems with phasing a protein (1300aa)   Francis E Reyes
  • [phenixbb] Problems with phasing a protein (1300aa)   Schubert, Carsten [PRDUS]
    • [phenixbb] Problems with phasing a protein (1300aa)   Kumar
    • [phenixbb] Problems with phasing a protein (1300aa)   Engin Ozkan
• [phenixbb] Question about scale of ED maps from phenix vs map coeffs when displayed in COOT   Schubert, Carsten [PRDUS]
  • [phenixbb] Question about scale of ED maps from phenix vs map coeffs when displayed in COOT   Pavel Afonine
    • [phenixbb] Question about scale of ED maps from phenix vs map coeffs when displayed in COOT   Ralf W. Grosse-Kunstleve
• [phenixbb] Question about scale of ED maps from phenix vs map coeffs when displayed in COOT   Ralf W. Grosse-Kunstleve
  • [phenixbb] Question about scale of ED maps from phenix vs map coeffs when displayed in COOT   Pavel Afonine
    • [phenixbb] occupancy   chern
• [phenixbb] ADP settings for protein and solvent   Katya Heldwein
  • [phenixbb] ADP settings for protein and solvent   Pavel Afonine
• [phenixbb] Postdoc Crystallographer Position - Berkeley   Paul Adams
• [phenixbb] AssertionError in twin refinement...   Francis E Reyes
  • [phenixbb] AssertionError in twin refinement...   Pavel Afonine
    • [phenixbb] AssertionError in twin refinement...   Francis E Reyes
      • [phenixbb] AssertionError in twin refinement...   Pavel Afonine
      • [phenixbb] AssertionError in twin refinement...   Francis E Reyes
      • [phenixbb] AssertionError in twin refinement...   Pavel Afonine
      • [phenixbb] AssertionError in twin refinement...   Francis E Reyes
      • [phenixbb] AssertionError in twin refinement...   Pavel Afonine
• [phenixbb] twin refine error message   Alex Taylor
  • [phenixbb] twin refine error message   Ralf W. Grosse-Kunstleve
• [phenixbb] Spermine molecule on a crystallographic two-fold axis   Marjolein Thunnissen
  • [phenixbb] Spermine molecule on a crystallographic two-fold axis   Ralf W. Grosse-Kunstleve
• [phenixbb] Refinement error   Katya Heldwein
  • [phenixbb] Refinement error   Ralf W. Grosse-Kunstleve
    • [phenixbb] twinned kick maps?   Petri Kursula
      • [phenixbb] twinned kick maps?   Pavel Afonine
• [phenixbb] Missing map for model   Folmer Fredslund
  • [phenixbb] Missing map for model   Pavel Afonine
    • [phenixbb] Missing map for model   Folmer Fredslund
      • [phenixbb] Missing map for model   Pavel Afonine
• [phenixbb] Geometry problem with the ligand   Jhon Thomas
  • [phenixbb] Geometry problem with the ligand   Ralf W. Grosse-Kunstleve
  • [phenixbb] Geometry problem with the ligand   Pavel Afonine
• [phenixbb] PHENIX user mailing list <phenixbb@phenix-online.org>   Ralf W. Grosse-Kunstleve
  • [phenixbb] PHENIX user mailing list <phenixbb@phenix-online.org>   Maia Cherney
  • [phenixbb] PHENIX user mailing list (Ca2+ ion in a special position)   Edward A. Berry
    • [phenixbb] PHENIX user mailing list (Ca2+ ion in a special position)   Ralf W. Grosse-Kunstleve
      • [phenixbb] PHENIX user mailing list (Ca2+ ion in a special position)   Dale Tronrud
• [phenixbb] weight optimization   peter hudson
  • [phenixbb] weight optimization   Ralf W. Grosse-Kunstleve
  • [phenixbb] weight optimization   Pavel Afonine
• [phenixbb] phenix automr   sbiswas2 at ncsu.edu
  • [phenixbb] phenix automr   Thomas C. Terwilliger
  • [phenixbb] phenix automr   Randy J. Read
    • [phenixbb] map files are missing in the output   Raja Dey
      • [phenixbb] map files are missing in the output   Schubert, Carsten [PRDUS]
• [phenixbb] can I turn off TLS for subsequent rounds of refinement?   Scott Classen
  • [phenixbb] can I turn off TLS for subsequent rounds of refinement?   Pavel Afonine
• [phenixbb] imaginary map (anomlous difference Fourier) from phenix   Ulrich Baumann
• [phenixbb] phenixbb Digest, Vol 40, Issue 31   Marjolein Thunnissen
  • [phenixbb] phenixbb Digest, Vol 40, Issue 31   Ralf W. Grosse-Kunstleve

Last message date: Tue Mar 31 14:57:32 PST 2009
Archived on: Tue Mar 31 14:57:33 PST 2009

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