[phenixbb] Refinement error

[Katya Heldwein]

Hi,

I am getting the following error when I run phenix.refine. How can I 
get rid of it?

Katya

=============================== refinement start 
==============================

   ----------structure factors based statistics (before refinement)----------

                         ----------X-ray data----------

show_stack(1): 
/private/var/automount/nfs/programs/i386-mac/cciapps/2009_02_15_2320/cci_apps_sources/mmtbx/twinning/twin_f_model.py(1676) 
r_values
show_stack(2): 
/private/var/automount/nfs/programs/i386-mac/cciapps/2009_02_15_2320/cci_apps_sources/mmtbx/twinning/twin_f_model.py(1837) 
r_work
show_stack(3): 
/private/var/automount/nfs/programs/i386-mac/cciapps/2009_02_15_2320/cci_apps_sources/mmtbx/f_model.py(2249) 
__init__
show_stack(4): 
/private/var/automount/nfs/programs/i386-mac/cciapps/2009_02_15_2320/cci_apps_sources/mmtbx/twinning/twin_f_model.py(1139) 
info
show_stack(5): 
/private/var/automount/nfs/programs/i386-mac/cciapps/2009_02_15_2320/cci_apps_sources/mmtbx/__init__.py(109) 
show_comprehensive
show_stack(6): 
/private/var/automount/nfs/programs/i386-mac/cciapps/2009_02_15_2320/cci_apps_sources/phenix/phenix/refinement/strategies.py(280) 
refinement_machine
show_stack(7): 
/private/var/automount/nfs/programs/i386-mac/cciapps/2009_02_15_2320/cci_apps_sources/phenix/phenix/refinement/driver.py(1121) 
run
show_stack(8): 
/private/var/automount/nfs/programs/i386-mac/cciapps/2009_02_15_2320/cci_apps_sources/phenix/phenix/refinement/command_line.py(89) 
run
show_stack(9): 
/programs/i386-mac/cciapps/2009_02_15_2320/cci_apps_sources/phenix/phenix/command_line/refine.py(16) 
<module>
Floating-point error (Python call stack above)
                This crash may be due to a problem in any imported
                Python module, including modules which are not part
                of the cctbx project. To disable the traps leading
                to this message, define these environment variables
                (e.g. assign the value 1):
                    BOOST_ADAPTBX_FPE_DEFAULT
                    BOOST_ADAPTBX_SIGNALS_DEFAULT
                This will NOT solve the problem, just mask it, but
                may allow you to proceed in case it is not critical.





-- 
Ekaterina Heldwein, Ph.D.
Assistant Professor
Department of Molecular Biology and Microbiology
Tufts University 136 Harrison Ave
Boston, MA 02111

phone: 617-636-0858
fax: 617-636-0337
e-mail: katya.heldwein at tufts.edu