[phenixbb] symmetry conflicts

Daniel Larsson daniel.larsson at icm.uu.se
Fri May 22 02:15:11 PDT 2020

I want to report an annoying bug in version 1.18.2-3874. My real_space_refine job ended with an error at the validation step saying Crystal symmetry mismatch between different files. This was when refining a PDB structure (first processed using ready_set) in a cryo-EM map. The “Ignore symmetry conflicts” checkbox was checked. The expected output files were generated, but no validation report was generated.


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