[phenixbb] Restraints file for a new amino acid residue
Agnes Thiane Pereira Machado
agnes_thiane at hotmail.com
Wed Nov 14 10:07:40 PST 2012
Hi
We are trying to refine a protein structure with a (covalently)
modified residue. The colosest discussion to our problem is:
http://www.phenix-online.org/pipermail/phenixbb/2010-August/015629.html
We ran:
phenix.elbow --residue SSC ourmodel.pdb
And read the due cif file at phenix refinement. The residue by itself is OK, but we were
not able to perform the peptide bond between C and N.
How to complete the .cif file such that it has due restraints
for
the peptide bond with this modified residue?
Agnes
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