[phenixbb] Error of Sculptor
Zhang yu
phenixzyfish at gmail.com
Wed Apr 25 09:06:08 PDT 2012
Dear Phenixer,
When I used Sculptor to generate a new model, there is a error which I
can not figure out. I input a PDB file (*.pdb) and an alignment file
(*.aln).
The following is the log file (contents in ######). There seems
something wrong with the *.aln file.
#################
Reading PDB file
----------------
File name: **/**/******/******/**.pdb
Separating solvent from macromolecules...
Reading alignment files
-----------------------
1. **/**/**.aln
#####################
The following is the content of the alignment file:
**_** MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPEGQY----GLEAAFRSV
**_** ---------MEIKRFGRIREVIPLPPLTEIQVESYRRALQADVPPEKRENVGIQAAFRET
* **: :*: :* * .**::*::: :: * : *::****..
What is the problem with the alignment file?
Thank you in advance!
Fish
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