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<p>Hi Oli,</p>
<p>the code that does this is quite old and the logic behind it is
described here:</p>
<p><a class="moz-txt-link-freetext" href="https://phenix-online.org/phenixwebsite_static/mainsite/files/newsletter/CCN_2011_07.pdf#page=15">https://phenix-online.org/phenixwebsite_static/mainsite/files/newsletter/CCN_2011_07.pdf#page=15</a></p>
<p>I can look into glitches in your specific example if you send me
all inputs.</p>
<p>Pavel<br>
</p>
<div class="moz-cite-prefix">On 12/20/21 12:58, Oliver Clarke wrote:<br>
</div>
<blockquote type="cite"
cite="mid:09017F0D-52F7-40DC-9670-C72297B58DC7@gmail.com">
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<div class="">Hi,</div>
<div class=""><br class="">
</div>
<div class="">While refining an X-ray structure using
phenix.refine (v1.20-4444), I get the attached table during
real-space refinement of coordinates. What are the criteria for
selecting the correct weighting factor? </div>
<div class=""><br class="">
</div>
<div class="">I assumed it would be the delta between R/Rfree
and/or the clash score, but it doesn't seem to exactly match
either in this table (and the same for other iterations of
refinement). Is it just incorrectly writing the clash score in
the "Accepted refinement result" line? Shouldn't this match the
line from the selected weight (here 0.125 so should be 6.1, not
7.1)?</div>
<div class=""><br class="">
</div>
<div class="">Cheers</div>
<div class="">Oli</div>
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