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Thanks.<br>
The options keep changing with version updates.<br>
The command line "phenix.pdbtools --help" does NOT list all options.<br>
<br>
After some digging I found that the equivalent option is<br>
model_statistics=true without the preceding '--'.<br>
<div class="moz-signature"><br>
<font color="#000099" face="Times">
Thanks, <br>
Abhinav </font>
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<font size="-1" color="#0099aa" face="Verdana">
JCSG@SSRL, SLAC <br>
Phone: (650) 926-2992 <br>
Fax: (650) 926-3292 <br>
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<br>
On 10/21/2011 10:07 AM, Ed Pozharski wrote:
<blockquote cite="mid:1319216826.7716.2.camel@lud.rx.umaryland.edu"
type="cite">
<pre wrap="">Normally you should be able to get the list of options by just running
the command without parameters. It may, of course, be incomplete: the
version that I have lists both --show-adp-statistics and
--show-geometry-statistics as "Show complete ADP (B-factors)
statistics.", which is unlikely.
On Fri, 2011-10-21 at 09:45 -0700, Abhinav Kumar wrote:
</pre>
<blockquote type="cite">
<pre wrap="">Hi,
I had been using the pdbtools to obtain the rmsd on various geometry
parameters using the command:
phenix.pdbtools my.pdb --show-geometry-statistics
Now pdbtools does not recognize the option
"--show-geometry-statistics"
What is the option now?
I am using phenix-1.7.2-869.
--
Thanks,
Abhinav
JCSG@SSRL, SLAC
Phone: (650) 926-2992
Fax: (650) 926-3292
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<pre wrap="">
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