Hi, <br>I am trying to use kick map to remove model bias with the following script<br>phenix.refine MR.1_refine_data.mtz MR.1_refine_001_refine_001.pdb output.prefix=refine-090828a simulated_annealing=True simulated_annealing.start_temperature=8000 strategy=individual_sites refine.params<br>
<br>However, the program says: <br>Sorry: Unknown file format: refine.params<br><br>I do not understand why the format of refine.params cannot be read, which has the following contents. Does anyone know why?<br>refinement {<br>
electron_density_maps {<br> map {<br> mtz_label_amplitudes = 2FOFCWT<br> mtz_label_phases = PH2FOFCWT<br> likelihood_weighted = True<br> obs_factor = 2<br> calc_factor = 1<br> kicked= True<br>
fill_missing_f_obs_with_weighted_f_model=True<br> }<br> map {<br> mtz_label_amplitudes = FOFCWT<br> mtz_label_phases = PHFOFCWT<br> likelihood_weighted = True<br> obs_factor = 1<br> calc_factor = 1<br>
kicked= True<br> fill_missing_f_obs_with_weighted_f_model=True<br> }<br>}<br><br><br><br><br>