[phenixbb] Molprobity and D-amino acids

[Nigel Moriarty]

Can you send the model to me, directly?

Cheers

Nigel

---
Nigel W. Moriarty
Building 33R0349, Molecular Biophysics and Integrated Bioimaging
Lawrence Berkeley National Laboratory
Berkeley, CA 94720-8235
Phone : 510-486-5709     Email : NWMoriarty at LBL.gov
Fax   : 510-486-5909      Web  : CCI.LBL.gov
ORCID : orcid.org/0000-0001-8857-9464


On Mon, Aug 9, 2021 at 1:49 AM Prasun Kumar <prasun.kumar at bristol.ac.uk>
wrote:

> Hi All
>
> I am trying to solve a structure with D-amino acids. After refinement when
> I check the Molprobity results, I find a lot of C-beta outliers (a snapshot
> is appended below). I also get clashes between the carbonyl group of one
> residue and the side chain of the other. Any suggestion would be really
> helpful.
>
> C-beta outlier
>
> Clashes
>
> Cheers
> PK
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