[phenixbb] real space correlation coefficient from the command line

Pavel Afonine pafonine at lbl.gov
Tue Feb 25 11:45:30 PST 2020

Hi Daniel,

> When running a real-space refine, there is an option in the results to save a text file with real-space correlation coefficients (correlation_coeficients.txt). Is there a way to calculate these numbers from the command line? It would save me a lot of clicking, sinceI have dozens of maps which I want to run in parallel and analyze using scripts.

phenix.map_model_cc model.pdb map.mrc resolution=3


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