[phenixbb] map to model - DNA model building
Manoj saxena
mks131 at gmail.com
Tue Aug 4 02:18:20 PDT 2020
Hello,
I am trying to fit a cryo-EM map of a DNA protein complex (3.3 A) using
the
map to model
in Phenix 1.18.2.3874, with a DNA sequence input in fasta format and
the
map as a .ccp4 file.
However the output model fitted in the map I am getting is many
fragmented
PDB files and only one chain of DNA.
What is the best way to get a higher fraction of the DNA model fitted
into
the map, can I switch off the segmentation of map and get both strands
fitted into the map. Or the only option is to manually build?
Thanks for your help
Regards
Manoj Saxena
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