[phenixbb] error installation dev-1.14.3405 - 1.14.3409

Guenter Fritz guenter.fritz.phenix.ccp4 at gmail.com
Tue Feb 12 07:14:29 PST 2019


Dear phenix developers,

I get errors trying to install latest builds from 1.14.3405, 3406, 3409  
64bit centos6 on Scientific Linux machines still running 6.6 (kernel 
2.6.32).
1.14.3395 installed without any problem.

The downloaded file is OK. 1.14.3409 64bit centos6 installed on Ubuntu 
18.04 without any problem.

I also tried to install from source but got the same error output (see 
below). I googeled some error outputs - looks like some python error. Do 
I have to update finally?

Best regards,

Guenter


Output trying to install from source:

[guenter at msm68 phenix-installer-dev-3409-source]$ ./install 
--prefix=/home/software/PHENIX/1.14.3409/ --nproc=10
Traceback (most recent call last):
   File "./bin/install.py", line 20, in <module>
     from libtbx.auto_build import install_distribution
   File 
"/home/software/PHENIX/1.14.3409/phenix-installer-dev-3409-source/lib/libtbx/auto_build/install_distribution.py", 
line 75, in <module>
     from libtbx.auto_build import install_base_packages
   File 
"/home/software/PHENIX/1.14.3409/phenix-installer-dev-3409-source/lib/libtbx/auto_build/install_base_packages.py", 
line 28, in <module>
     from .package_defs import *
   File 
"/home/software/PHENIX/1.14.3409/phenix-installer-dev-3409-source/lib/libtbx/auto_build/package_defs.py", 
line 18, in <module>
     from .bootstrap import Toolbox
   File 
"/home/software/PHENIX/1.14.3409/phenix-installer-dev-3409-source/lib/libtbx/auto_build/bootstrap.py", 
line 14, in <module>
     import argparse
ImportError: No module named argparse

Similar from an installer:

[guenter at msm68 
phenix-installer-dev-3405-intel-linux-2.6-x86_64-centos6]$ ./install 
--prefix=/home/software/PHENIX/1.14.3405/
Traceback (most recent call last):
   File "./bin/install.py", line 20, in <module>
     from libtbx.auto_build import install_distribution
   File 
"/home/software/PHENIX/1.14.3405/phenix-installer-dev-3405-intel-linux-2.6-x86_64-centos6/lib/libtbx/auto_build/install_distribution.py", 
line 75, in <module>
     from libtbx.auto_build import install_base_packages
   File 
"/home/software/PHENIX/1.14.3405/phenix-installer-dev-3405-intel-linux-2.6-x86_64-centos6/lib/libtbx/auto_build/install_base_packages.py", 
line 28, in <module>
     from .package_defs import *
   File 
"/home/software/PHENIX/1.14.3405/phenix-installer-dev-3405-intel-linux-2.6-x86_64-centos6/lib/libtbx/auto_build/package_defs.py", 
line 18, in <module>
     from .bootstrap import Toolbox
   File 
"/home/software/PHENIX/1.14.3405/phenix-installer-dev-3405-intel-linux-2.6-x86_64-centos6/lib/libtbx/auto_build/bootstrap.py", 
line 14, in <module>
     import argparse
ImportError: No module named argparse


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