[phenixbb] [cctbxbb] CCTBX documentation questionnaire

[Dorothee Liebschner]

Hi Lance,

Thank you for passing along the questionnaire. The more feedback we get,
the better.
If you could make examples of using the CCTBX available, that would be
great! One common issue found in questionnaire is indeed the lack of
examples.

Thanks,

Dorothee



On Fri, Aug 16, 2019 at 12:06 PM Lance Westerhoff <lance at quantumbioinc.com>
wrote:

>
> Hi Dorothee-
>
> More documentation sounds great. We’ve used CCTBX extensively so I’ll see
> what our group has to say concerning your request and I’ll pass along your
> questionnaire.
>
> As part of your efforts, would you like examples of the use of CCTBX in
> production? We’ve developed a number CCTBX-based tools (even a stripped
> down, light weight QM/MM refinement engine we use for testing) and we’d be
> happy to opensource some of this code in our github account if you’d like.
> It doesn’t hurt us and if it helps folks see how CCTBX can be used, all the
> better. If you’re interested, let me see about opening it up. Thanks and
> have a great weekend!
>
> -Lance
> ____________________
> Lance M. Westerhoff, Ph.D.
> President and General Manager
> QuantumBio Inc.
>
> WWW:    http://www.quantumbioinc.com
> Email:    lance at quantumbioinc.com <lance at quantumbioinc.com>
>
> Phone:   814-235-6908
> Fax:        814-235-6909
>
>
> This message and any attachments are solely for the intended recipient and
> should be considered confidential. If you are not the intended recipient,
> please immediately and permanently delete.
>
>
>
> On Aug 15, 2019, at 3:04 PM, Dorothee Liebschner <dcliebschner at lbl.gov>
> wrote:
>
> Hi everyone,
>
> During this year's ECM computing school, it came up that the CCTBX does
> not have a lot of documentation. This seems to be a major reason why people
> don't use it, even if they would like to employ the libraries.
> We would like to find out which parts of the CCTBX are the most
> interesting for users. We certainly cannot provide extensive documentation
> for the entire toolbox, but we can see what we can do once we know the main
> areas of interest.
> So if you were in the situation of wanting to use the CCTBX but decided to
> stay away from it because the documentation was non-existent or obscure,
> please let us know by filling out the questionnaire below (it's anonymous):
>
> questionnaire CCTBX documentation <https://forms.gle/9RawJFfHyEvhCVVP7>
>
> Best wishes,
>
> Dorothee
>
> --
> Project Scientist, Molecular Biophysics and Integrated Bioimaging
> Lawrence Berkeley National Laboratory
> 1 Cyclotron Road, M/S 33R0345
> Berkeley, CA 94720
> Tel: (510) 486-5709
> Fax: (510) 486-5909
> Web: https://phenix-online.org
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-- 
Project Scientist, Molecular Biophysics and Integrated Bioimaging
Lawrence Berkeley National Laboratory
1 Cyclotron Road, M/S 33R0345
Berkeley, CA 94720
Tel: (510) 486-5709
Fax: (510) 486-5909
Web: https://phenix-online.org
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