[phenixbb] how to bypass/deactivate dictionnary check for restraints in phenix.refine

Maxime Cuypers maximecuypers at gmail.com
Fri Feb 2 07:36:56 PST 2018

Hello All,

I am refining an unusual complex moiety in a protein xl with neutron data.
Does anyone know if it is possible to bypass/deactivate dictionnary .cif
i got the blocking error message "it looks like angle and bond restraints
are conflicting." and Phenix.refine stops.
but really it s not conflicting: my .cif file works great in coot to model
the complex. it is hydrogen based, so i really need restraints to get it

any clues welcome, many thanks in advance.

Dr. Maxime Cuypers
Post-Doctoral Research Associate, Structural Biology
St Jude Children s Research Hospital,
262 Danny Thomas Place
Memphis, TN 38105-3678, USA
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