[phenixbb] Model_vs_data speed

Eric Williams ericwilliams at pobox.com
Sat Oct 14 18:35:27 PDT 2017

I'm having a devil of a time getting model_vs_data to run in a timely
fashion. Running the latest stable Linux build on Ubuntu 14.04 takes on the
order of 3 minutes per structure. That wouldn't be so bad if I weren't
trying to run it on every entry in the PDB. Is it just a limitation of
Python? SFCheck, which I think is written mostly in FORTRAN, runs in a few
seconds. Any help anyone could offer would be appreciated. Thanks. :)

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