[phenixbb] Viewing different residues in the same location in Coot.

Nigel Moriarty nwmoriarty at lbl.gov
Fri Oct 28 14:27:58 PDT 2016


Folks

Phenix has the ability to refine two different amino acids (using alt.
loc.) in the one place like in 1ejg. You can read more about it here.

https://www.phenix-online.org/newsletter/CCN_2015_07.pdf#page=12
This crashes Coot until you add

 allow_duplicate_sequence_numbers()

to $HOME/.coot.py in OSX or the appropriate place on Windows. For Windows,
as there is no $HOME, Coot uses .coot.py or .coot-preferences/ directory
for configuration - these can be found (added to) the directory in which
Coot was installed (e.g. C:\WinCoot).

Nigel

PS While you're at it, why not add these lines below to automatically load
FEM and polder maps.

set_auto_read_column_labels("FEM", "PHIFEM", 0)

set_auto_read_column_labels("mFo-DFc_polder", "PHImFo-DFc_polder", 1)

---
Nigel W. Moriarty
Building 33R0349, Molecular Biophysics and Integrated Bioimaging
Lawrence Berkeley National Laboratory
Berkeley, CA 94720-8235
Phone : 510-486-5709     Email : NWMoriarty at LBL.gov
Fax   : 510-486-5909       Web  : CCI.LBL.gov
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