[phenixbb] Rebuild fails in Rosetta-MR
Rhys Grinter
rhys.grinter at monash.edu
Sun Feb 21 21:13:31 PST 2016
Dear all,
I'm currently trying to improve an model for a difficult MR problem using
Rosetta-MR,
When the program gets to the Rebuild stage it fails with the following
message:
*Error message:*
child process stderr output:
command: 'sh
.../MR_ROSETTA_17/GROUP_OF_ROSETTA_REBUILD_1/RUN_1/REBUILD_IN_SETS_1/RUN_4/WORK_1/run_rebuild.sh"'
.../MR_ROSETTA_17/GROUP_OF_ROSETTA_REBUILD_1/RUN_1/REBUILD_IN_SETS_1/RUN_4/WORK_1/run_rebuild.sh:
line 5: 8996 Trace/BPT trap: 5
"/Applications/Rosetta/main/source/bin/mr_protocols.macosclangrelease"
@"rebuild.flags" > "rebuild.log" 2>&1
Failed to run REBUILD
Sorry: Failed to run REBUILD...see log file in
.../MR_ROSETTA_17/GROUP_OF_ROSETTA_REBUILD_1/RUN_1/REBUILD_IN_SETS_1/RUN_4/WORK_1/rebuild.log
Sorry: mr_rosetta failed...
Sorry routine failed
Please see log file for full error message
*In the rebuild logfile:*
dyld: lazy symbol binding failed: Symbol not found: ___sincos_stret
Referenced from:
/Applications/Rosetta/main/source/bin/mr_protocols.macosclangrelease
Expected in: /usr/lib/libSystem.B.dylib
dyld: Symbol not found: ___sincos_stret
Referenced from:
/Applications/Rosetta/main/source/bin/mr_protocols.macosclangrelease
Expected in: /usr/lib/libSystem.B.dylib
Has anyones experienced this error?
Cheers,
Rhys
--
Dr Rhys Grinter
Sir Henry Wellcome Fellow
Monash University
+61 (0)3 9902 9213
+61 (0)403 896 767
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