[phenixbb] [ccp4bb] Phenix; converting a map to structure factors
pafonine at lbl.gov
Fri Jul 10 18:41:48 PDT 2015
> Is any software convert mtz file into mrc file (for viewing in chimera)?
> In addition, by mrc file I can run phenix,real_space_refine very
> nicely. But for knowledge gaining purpose, I convert a mrc file to a
> mtz file by phenix.map_to_structure_factors, and then run the
> GUI phenix refine with the phenix.map_to_structure_factors converted
> mtz file (from mrc) file and a model PDB (from mrc), first the
> GUI phenix refine will give very high Rwork and Rfree, secondly the
> mtz output density by GUI phenix looks does not fit the initial
> mrc density at all, thus the pdb models given by
> phenix,real_space_refine and GUI phenix refine seem strongly different.
> Is any way to get similar pdb models by phenix,real_space_refine and
> GUI phenix refine?
Results should be similar, in general without doing anything special.
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