[phenixbb] citation

[Sneha Rangarajan]

Hello All,

I have a non-Phenix problem- finding shape complementarity!
I tried running the script for sc (ccp4) but it doesn't run to completion to give me the sc number.
It stops saying "imaginary contain". What does that mean?
However there is no error as such. I gave it the pdb that I got after my phenix refinement.

Is there something I should be doing first to the pdb after refinement before running sc on it?

Here is the script and I am also attaching the pdb.

sc XYZIN F7-2_refine_113.pdb <<eof-sc
MOLECULE 1
CHAIN A
CHAIN B
MOLECULE 2
CHAIN C
eof-sc

Thanks in advance!!

Sneha

From: Randy Read [mailto:rjr27 at cam.ac.uk]
Sent: Tuesday, April 21, 2015 3:42 AM
To: Sneha Rangarajan
Subject: Re: [phenixbb] citation

Dear Sneha,

Here's a link to the publication (which is open access):
http://scripts.iucr.org/cgi-bin/paper?ba5210.

Best wishes,

Randy Read


On 20 Apr 2015, at 19:02, Sneha Rangarajan <rsneha at umd.edu<mailto:rsneha at umd.edu>> wrote:

Hello,

What is the correct way to cite Phenix MRage?

Thanks,
Sneha
_______________________________________________
phenixbb mailing list
phenixbb at phenix-online.org<mailto:phenixbb at phenix-online.org>
http://phenix-online.org/mailman/listinfo/phenixbb
Unsubscribe: phenixbb-leave at phenix-online.org<mailto:phenixbb-leave at phenix-online.org>

------
Randy J. Read
Department of Haematology, University of Cambridge
Cambridge Institute for Medical Research      Tel: + 44 1223 336500
Wellcome Trust/MRC Building                   Fax: + 44 1223 336827
Hills Road                                    E-mail: rjr27 at cam.ac.uk<mailto:rjr27 at cam.ac.uk>
Cambridge CB2 0XY, U.K.                       www-structmed.cimr.cam.ac.uk<http://www-structmed.cimr.cam.ac.uk>

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://phenix-online.org/pipermail/phenixbb/attachments/20150427/0e705e1f/attachment-0001.htm>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: F7-2_refine_113.pdb
Type: application/octet-stream
Size: 295685 bytes
Desc: F7-2_refine_113.pdb
URL: <http://phenix-online.org/pipermail/phenixbb/attachments/20150427/0e705e1f/attachment-0001.obj>