[phenixbb] Phenix command to align the PDB sequence and input sequence

Folmer Fredslund folmerf at gmail.com
Fri Apr 10 01:20:23 PDT 2015


Hi Smith,

PHENIX uses muscle (http://www.drive5.com/muscle/) to align sequences (
https://www.phenix-online.org/documentation/phenix_gui.html#other-tools).

You can access muscle with "phenix.muscle" on the command line.

Hope this helps,
Folmer Fredslund

2015-04-10 9:20 GMT+02:00 Smith Liu <smith_liu123 at 163.com>:

> Dear All,
>
> Will you please tell me the Phenix command to align the PDB sequence and
> input sequence?
>
> I am looking forward to getting your reply.
>
> Smith
>
>
>
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-- 
Folmer Fredslund
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