[phenixbb] refinement for non-standard DNA base
john123cheong at gmail.com
Thu Sep 11 09:02:05 PDT 2014
I have 5-fluoro-Uracil in my DNA:protein complex.
I modeled 5-F-dU into the map, ran eLBOW for geometry file and did
After the refinement, 5-F-dU is not connected to the neighboring
nucleotides and the phosphate oxygens are rotated to wrong positions.
Can anyone teach me how to refine with non-standard DNA base ?
Any help or advice would be appreciated.
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