[phenixbb] Calculate average B-factor?

[Chen Zhao]

Thanks a lot, Pavel!

Best,
Chen

On Sat, Oct 4, 2014 at 4:56 PM, Pavel Afonine <pafonine at lbl.gov> wrote:

>  Hi Chen,
>
> yes:
>
> phenix.b_factor_statistics model.pdb
> or
> phenix.pdbtools model.pdb model_stat=true
>
> It will take case of TLS etc appropriately.
>
> Pavel
>
>
>
> On 10/4/14 1:03 PM, Chen Zhao wrote:
>
>   Dear all,
>
>  I am just wondering whether there is a command line tool in phenix that
> calculates the average B-factor of a PDB file? Can it deal with the ANISOU
> records (from TLS refinement or not) properly? I looked into previous posts
> but the  --show-adp-statistics option in phenix.pdbtools seems to be no
> longer available in the version (1.9-1678) I installed.
>
>  Thank you so much,
>  Chen
>
>
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>
>
>
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