[phenixbb] Multiprocessor refine

Kenneth A. Satyshur satyshur at wisc.edu
Sun Mar 23 09:36:55 PDT 2014

The FAQ on the web says that phenix.refine uses multiprocessors, yet only phenix.autobuild seems to use MP.
Do I need a special version of Phenix? I am using GUI 1.8.4-1496

>How can I use multiple processors to run a job? 

>Only AutoBuild(http://www.phenix-online.org/documentation/autobuild_gui.htm), LigandFit(http://www.phenix-online.org/documentation/ligandfit_gui.htm),
phaser.MRage(http://www.phenix-online.org/documentation/MRage.htm), phenix.refine(http://www.phenix-online.org/documentation/refine_gui.htm), the
structure comparison GUI(http://www.phenix-online.org/documentation/structure_comparison.htm), and
phenix.find_tls_groups support runtime >configuration of parallel processing.
In most cases this is done by adding the "nproc" keyword, for instance:

RHEL6 x86_64 

Kenneth A. Satyshur, M.S.,Ph.D.
Senior Scientist
University of Wisconsin
Madison, Wisconsin 53706
-------------- next part --------------
A non-text attachment was scrubbed...
Name: satyshur.vcf
Type: text/x-vcard
Size: 323 bytes
Desc: Card for "Kenneth A. Satyshur" <satyshur at wisc.edu>
URL: <http://phenix-online.org/pipermail/phenixbb/attachments/20140323/8ca836ea/attachment.vcf>

More information about the phenixbb mailing list