[phenixbb] command line molprobity tools

Nathaniel Echols nechols at lbl.gov
Wed May 1 12:52:11 PDT 2013


On Wed, May 1, 2013 at 12:48 PM, Engin Özkan <eozkan at stanford.edu> wrote:
> I tried to run phenix.ramalyze and rotalyze with the outliers_only=True
> flags. I get the following errors
> Usage: phenix.ramalyze mypdb.pdb
> Usage: phenix.rotalyze mypdb.pdb
>
> I thought ramalyze used to work with --outliers_only=True as arguments, but
> that seems to fail, too. Is this a bug, or am I misreading the usage text?

bug.  Will fix this now.

-Nat


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