[phenixbb] Molecule and maps will not load into coot from Phenix 1.7.1-743

Jobichen Chacko jobichenc at gmail.com
Fri Oct 28 03:33:21 PDT 2011

Dear Nat,
I already tried two versions, both downloaded from the following site.
I suspect this problem is because of ubuntu. Can you recommend any
specific build of coot for ubuntu. I have no problem in opening the
maps and models from Refmac, it opens nicely. Do you think is it a
dependency issue??



On Fri, Oct 28, 2011 at 1:37 AM, Nathaniel Echols <nechols at lbl.gov> wrote:
> On Wed, Oct 26, 2011 at 9:47 PM, Jobichen Chacko <jobichenc at gmail.com> wrote:
>> I upgraded to coot 0.6.2. But still the problem is not rectified.
>> Any suggestions.
> Okay, after seeing the console output, the problem is here:
> 'import site' failed; use -v for traceback
> (use-graphics-interface-state)
> DEBUG:: stating pydirectory /usr/local/share/coot/python
> INFO:: importing coot.py from /usr/local/share/coot/python/coot.py
> Importing python module coot using command from coot import *
> Traceback (most recent call last):
>  File "<string>", line 1, in <module>
>  File "/usr/local/share/coot/python/coot.py", line 8, in <module>
>   import new
> ImportError: No module named new
> ERROR:: could not import coot.py
> If you're seeing ImportError anywhere, this almost always means that
> the Python module paths are not set correctly.  Fixing this is beyond
> the scope of PHENIX, and I've never been able to figure out why some
> Coot builds have this problem; you probably need to try a different
> binary package.  (Where did you download it from?)
> -Nat
> _______________________________________________
> phenixbb mailing list
> phenixbb at phenix-online.org
> http://phenix-online.org/mailman/listinfo/phenixbb

More information about the phenixbb mailing list