[phenixbb] phenix.phaser generate .sol file

Nathaniel Echols nechols at lbl.gov
Mon Oct 24 08:52:39 PDT 2011

On Mon, Oct 24, 2011 at 6:15 AM, G Y <gysubscribe at gmail.com> wrote:
> Thank you for your kind answer. In fact, what I need are the euler angles,
> translation vectors and Z-scores for each solution. I run phenix.phaser from
> a shell script by phenix.phaser params.eff, not from GUI, still I can not
> file a .sol file.
> How can I get those information if there is no .sol file? I found in output
> log file there are some information like that. But they are not summarized
> in a nice list and located at different part of the log file which makes it
> difficult to grep these informations. Is there any easy way to obtain a list
> for euler angles, translation vectors, Z-socre for all the solutions in a
> nice format?

It looks like Airlie just checked in some code to enable this, which
I've modified slightly to fit better into the GUI.  So, starting


will cause it to output the .sol file, which for the very simple
example I ran looks like this:

#  this is the job title
SOLU SET RFZ=16.6 TFZ=27.4 PAK=0 LLG=1362 TFZ==26.9 LLG=1362
SOLU 6DIM ENSE 1l3r EULER 180.199 180.000 0.000 FRAC -0.50025 -0.00071
0.00010 BFAC 0.00000

Does this have everything that you need?


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