[phenixbb] re-building chains

Thomas C. Terwilliger terwilliger at lanl.gov
Fri Oct 14 07:31:44 PDT 2011

Hi Leonid,

I'm afraid you would have to do this in separate runs, first with
rebuild-in-place=false, and then true, and even then it won't do exactly
what you need.  I see what you want and I will add it to my to-do list.

All the best,
Tom T

>> Hi, how exactly can one tell Autobuild to rebuild-in-place chains A and
>> B from the input model, but build chain C de-novo?
>> If I give it list of chains to re-build (rebuild_near_chain="A B" in
>> GUI, dev-874 version), what happens is that either all chains are
>> rebuild-in-place (if rebuild-in-place=True) or all chains are built
>> de-novo (if rebuild-in-place=False).
>> Thanks!
>> --
>> Dr. Leonid A. Sazanov
>> Research group leader
>> Medical Research Council
>> Mitochondrial Biology Unit
>> Wellcome Trust / MRC Building
>> Hills Road
>> Cambridge
>> CB2 0XY
>> WEB: www.mrc-mbu.cam.ac.uk
>> Tel: +44-1223-252910
>> Fax: +44-1223-252915
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