[phenixbb] measuring angle
Pavel Afonine
pafonine at lbl.gov
Tue Nov 22 08:01:34 PST 2011
Hi Hena,
> In PDBSET, I can use CHAIN command in shell script to write a pdb file
> with a desired chain ID. What is the command
> in shell script to write a pdb file with a desired SEGID?
phenix.pdbtools is the tool to do such manipulations:
http://www.phenix-online.org/documentation/pdbtools.htm
Examples:
- remove chain A:
phenix.pdbtools model.pdb remove="chain A"
or equivalently:
phenix.pdbtools model.pdb keep="not chain A"
- remove SEGID:
phenix.pdbtools model.pdb remove="segid A"
Pavel
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