[phenixbb] AutoBuild Question

Tom Terwilliger terwilliger at lanl.gov
Mon Dec 12 10:00:44 PST 2011


Hi Ed,

Thanks again for the question!  The command 

  phenix.autobuild after_autosol

works if you have run autosol all the way through and obtained a model (as in your case); if you had no model (as in the test I ran to see if it worked), it would have stopped.  I have fixed the problem so it should work in either case (starting tomorrow).

All the best,
Tom T

On Dec 12, 2011, at 8:49 AM, Tom Terwilliger wrote:

> Hi Ed,
> 
> You should be able to say
> 
>   phenix.autobuild after_autosol
> 
> however I see that with the current version that does not work (it asks for a sequence file). Perhaps that is the reason for your question.  I'll fix this.
> 
> All the best,
> Tom T
> 
> On Dec 12, 2011, at 8:13 AM, Edward A. Berry wrote:
> 
>> Recently was mentioned a command to run autobuild automatically after autosolve-
>> could someone remind me the syntax?
>> 
>> Thanks.
>> Ed
>> _______________________________________________
>> phenixbb mailing list
>> phenixbb at phenix-online.org
>> http://phenix-online.org/mailman/listinfo/phenixbb
> 
> 
> Thomas C. Terwilliger
> Mail Stop M888
> Los Alamos National Laboratory
> Los Alamos, NM 87545
> 
> Tel:  505-667-0072                 email: terwilliger at LANL.gov
> Fax: 505-665-3024                 SOLVE web site: http://solve.lanl.gov
> PHENIX web site: http:www.phenix-online.org
> ISFI Integrated Center for Structure and Function Innovation web site: http://techcenter.mbi.ucla.edu
> TB Structural Genomics Consortium web site: http://www.doe-mbi.ucla.edu/TB
> CBSS Center for Bio-Security Science web site: http://www.lanl.gov/cbss
> 
> 
> 
> 


Thomas C. Terwilliger
Mail Stop M888
Los Alamos National Laboratory
Los Alamos, NM 87545

Tel:  505-667-0072                 email: terwilliger at LANL.gov
Fax: 505-665-3024                 SOLVE web site: http://solve.lanl.gov
PHENIX web site: http:www.phenix-online.org
ISFI Integrated Center for Structure and Function Innovation web site: http://techcenter.mbi.ucla.edu
TB Structural Genomics Consortium web site: http://www.doe-mbi.ucla.edu/TB
CBSS Center for Bio-Security Science web site: http://www.lanl.gov/cbss




-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://phenix-online.org/pipermail/phenixbb/attachments/20111212/dfd296cf/attachment.htm>


More information about the phenixbb mailing list