[phenixbb] nucleic acid secondary restraints breaking in 1.7.1-743
Nathaniel Echols
nechols at lbl.gov
Mon Aug 15 07:19:04 PDT 2011
On Mon, Aug 15, 2011 at 6:04 AM, Francis E Reyes
<Francis.Reyes at colorado.edu> wrote:
> Got past that part but now a new error
>
> Traceback (most recent call last):
> File "/usr/local/phenix-dev-842/phenix/phenix/command_line/refine.py", line 11, in <module>
> command_line.run(command_name="phenix.refine", args=sys.argv[1:])
> File "/usr/local/phenix-dev-842/phenix/phenix/refinement/command_line.py", line 96, in run
> call_back_handler=call_back_handler)
> File "/usr/local/phenix-dev-842/phenix/phenix/refinement/driver.py", line 1376, in run
> ncs_manager = self.ncs_manager)
> File "/usr/local/phenix-dev-842/phenix/phenix/refinement/strategies.py", line 489, in refinement_machine
> fmodels.fmodel_xray().update_f_part(
> AttributeError: 'manager' object has no attribute 'update_f_part'
>
> Immediately after bulk solvent modeling and scaling.
The option "use_statistical_model_for_missing_atoms" is disabled until
further notice - unfortunately, the current code does not actually
warn you before it crashes. I'll fix that now.
-Nat
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