[phenixbb] question about autosol

Pavel Afonine PAfonine at lbl.gov
Mon Mar 22 11:13:02 PDT 2010


Hi,

you are using PHENIX 1.5 version. It is relatively old. Could you please 
update to the latest version and see if that fixes the problem?

http://www.phenix-online.org/download/nightly_builds.cgi

Please let us know if you still having this problem after updating to 
the latest version.

Pavel.


On 3/22/10 11:07 AM, crystallogrphy wrote:
> Hi,
> When I run phenix.autosol with this scripts (phenix.autosol 
> data=output-anomalous.sca input_phase_file=AutoMR_run_10_/MR.1.mtz 
> input_phase_labels="F PHIC FOM" f_prime=-8.13 f_double_prime=5.61 
> kp-zntb.seq atom_type=Zn), the job is terminated by the error message. 
> Does anyone know what I should do? I am using Phenix-1.5 version.
>
> Floating-point error (Python and libc call stacks above)
>                 This crash may be due to a problem in any imported
>                 Python module, including modules which are not part
>                 of the cctbx project. To disable the traps leading
>                 to this message, define these environment variables
>                 (e.g. assign the value 1):
>                     BOOST_ADAPTBX_FPE_DEFAULT
>                     BOOST_ADAPTBX_SIGNALS_DEFAULT
>                 This will NOT solve the problem, just mask it, but
>                 may allow you to proceed in case it is not critical.



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