[phenixbb] Fwd: autobuild failure

Tom Terwilliger terwilliger at lanl.gov
Thu Jul 29 09:12:31 PDT 2010


Hi Abhishek,

I'm sorry for the trouble! This problem with non-standard space groups  
should be fixed, so if you download any recent version of PHENIX it  
should be ok. Please let me know if that doesn't do it!

All the best,
Tom T


On Jul 29, 2010, at 10:03 AM, abhishek dey wrote:

>
>
> ---------- Forwarded message ----------
> From: abhishek dey <41.abhishek at gmail.com>
> Date: 29 July 2010 21:27
> Subject: autobuild failure
> To: phenixbb at phenix-online.org
>
>
> Dear all,
>   I am facing some problem while running the Autobuild option for  
> PHENIX-1.6-289 version. I uploaded the mtz file, sequence of my  
> protein and the pdb file and started running AUTOBUILD. but the  
> program stopped with the following error message
> SG: P 2 21 21
> Cell: [49.539999999999999, 99.140000000000001, 144.41999999999999,  
> 90.0, 90.0, 90.0]
> Inverse hand of space group:  P 2 21 21
> Creating sg entry from  /data/dey/2779/rv2779p22121_sort2.mtz
> Unit cell: (49.54, 99.14, 144.42, 90, 90, 90)
> Space group: P 2 21 21 (No. 18)
> Space group name is:  P 2 21 21  symbol is: p22121
>
>
> ****************************************
> AutoBuild Input failed
> Need a symfile for solve
> .the  working spacegroup is P 2 21 21 it will be helpful if someone  
> give useful suggestion on this.
> thanks in advance
> -- 
> Abhishek Dey
>
>
>
>
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> phenixbb at phenix-online.org
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Thomas C. Terwilliger
Mail Stop M888
Los Alamos National Laboratory
Los Alamos, NM 87545

Tel:  505-667-0072                 email: terwilliger at LANL.gov
Fax: 505-665-3024                 SOLVE web site: http://solve.lanl.gov
PHENIX web site: http:www.phenix-online.org
ISFI Integrated Center for Structure and Function Innovation web site: http://techcenter.mbi.ucla.edu
TB Structural Genomics Consortium web site: http://www.doe-mbi.ucla.edu/TB
CBSS Center for Bio-Security Science web site: http://www.lanl.gov/cbss




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