[phenixbb] Masking a ligand

[Pavel Afonine]

Hi Esmael,

remove the ligand from PDB file or set occupancy of the ligand to zero 
and use phenix.maps to compute any number of desired maps.

To use phenix.maps:

- from the command line type phenix.maps and hit Enter, then follow the 
instructions on the screen;
- from PHENIX GUI use Maps -> Create Maps.

Pavel.


On 7/8/10 12:25 PM, esmael wrote:
> Hi,
>
> I am working with a protein that has many ligands; I need a density map in the "MTZ" format without ligands.  Is there a way to do this?
>
> Thanks a lot,
> Esmael
>
>
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