[phenixbb] auto-open MTZ scheme
Ralf W. Grosse-Kunstleve
rwgk at cci.lbl.gov
Sun Jan 24 10:22:50 PST 2010
Another idea: we could use the history lines to communicate in a flexible
way what we want the browser to auto-open. E.g.
auto_open = 2FOFCWT PH2FOFCWT
auto_open = 2FOFCWT_fill PH2FOFCWT_fill
would ask the viewer to open these two maps when the mtz file is read.
Then we could even provide a mechanism for users to select themselves
what maps are automatically opened, e.g.:
phenix.refine.electron_density_maps {
map {
mtz_label_amplitudes = my_map.f
mtz_label_phases = my_map.phi
likelihood_weighted = True
obs_factor = 3
calc_factor = 2
kicked = True
fill_missing_f_obs_with_weighted_f_model = True
viewer_auto_open = True
}
}
This could be taken further:
auto_open = important_refine_003.pdb
auto_open = 2FOFCWT PH2FOFCWT
auto_open = 2FOFCWT_fill PH2FOFCWT_fill
Maybe with extra settings:
auto_open = 2FOFCWT PH2FOFCWT contour_level=3 rgb=0,0,1
auto_open = 2FOFCWT_fill PH2FOFCWT_fill contour_level=3 rgb=0,1,0
Ralf
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