[phenixbb] No clash evaluation between symmetry mates in phenix.refine
Ralf W. Grosse-Kunstleve
rwgk at yahoo.com
Tue Dec 7 18:44:32 PST 2010
Hi Keitaro,
> By the way, in this situation, I'm wondering what the appropriate way
> for bulk solvent correction is.
> How is the solvent mask calculated in phenix.refine?
> Is the protein region, which overlaps with symmetry mates, included
> in solvent mask with smaller occupancies?
No, we're not doing anything special. -- I think it would be quite tricky
to do something that's theoretically better than what we have right now,
and I wouldn't be surprised if it didn't make any significant difference
for the end results, after all the work.
Ralf
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