[phenixbb] 0.00 Refined Isotropic ADPs
Pavel Afonine
pafonine at lbl.gov
Tue Aug 31 15:54:21 PDT 2010
Hi Joe,
this is weird... Could you please send me the model and data files for
investigation?
Thanks!
Pavel.
On 8/31/10 3:40 PM, Joseph Noel wrote:
> Hi All.
>
> Me again! LOL I am sure this has come up and related to how the
> "B-factor" in the refined PDB's ADP column is calculated including the
> overall anisotropic B-factor, etc but is it unusual to have isotropic
> ADPs refine to 0.00? I have several nice structures with 0.00
> isotropic ADPs. I am not refining TLS or anisotropic ADPs at all. Just
> the normal course of refinement. These are regions of a high degree of
> order and the maps are beautiful but just wandering what the 0.00
> ultimately means particularly when I eventually submit to the Protein
> Data Bank.
>
> Joe
>
> P.S. Nat's tips on COOT and Phenix are working beautifully now! Thanks
> Nat!
> ___________________________________________________________
> Joseph P. Noel, Ph.D.
> Investigator, Howard Hughes Medical Institute
> Professor, The Jack H. Skirball Center for Chemical Biology and Proteomics
> The Salk Institute for Biological Studies
> 10010 North Torrey Pines Road
> La Jolla, CA 92037 USA
>
> Phone: (858) 453-4100 extension 1442
> Cell: (858) 349-4700
> Fax: (858) 597-0855
> E-mail: noel at salk.edu <mailto:noel at salk.edu>
>
> Web Site (Salk): http://www.salk.edu/faculty/faculty_details.php?id=37
> Web Site (HHMI): http://hhmi.org/research/investigators/noel.html
> ___________________________________________________________
>
>
> _______________________________________________
> phenixbb mailing list
> phenixbb at phenix-online.org
> http://phenix-online.org/mailman/listinfo/phenixbb
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://phenix-online.org/pipermail/phenixbb/attachments/20100831/93246b1b/attachment-0003.htm>
More information about the phenixbb
mailing list