[phenixbb] Can Phenix refine B factors for several residues only?

[zhangh1 at umbc.edu]

Hi Pavel:

That's cool! I should have read phenix.refine doc more carefully. I will
give it a try and see how it comes. Thanks a lot!

Best Regards, Hailiang

>   Hi Hailiang,
>
> you can easily do it in phenix.refine.
>
> Example:
>
> phenix.refine model.pdb data.mtz strategy=individual_adp
> adp.individual.iso="chain A and resseq 10:20"
>
> This will refine isotropic B-factors of atoms in residues from 10 to 20
> in chain A. All the other atomic model parameters will not be refined.
>
> Let me know if you need more examples or need any help with this.
>
> In general, you can apply any combination of refinement strategies
> (coordinates, B-factors, etc..) to any selected part of your model.
>
> Pavel.
>
>
> On 8/26/10 12:00 PM, zhangh1 at umbc.edu wrote:
>> Hi,
>>
>> I want to refine B factors for several residues only (all the other B
>> factors and all coordinates fixed, I know it sounds weird but there is a
>> reason to try that). Is there anyway Phenix can do this? Thanks for any
>> suggestions!
>>
>> Best Regards, Hailiang
>>
>>
>> _______________________________________________
>> phenixbb mailing list
>> phenixbb at phenix-online.org
>> http://phenix-online.org/mailman/listinfo/phenixbb
>
>
>