[phenixbb] installing phenix on Fedora core 10
amadrona at uci.edu
amadrona at uci.edu
Wed Aug 4 16:56:26 PDT 2010
Thank you. I can't believe how easy that was. My phenix.maps problem is
solved. It works as it should. I was also having a problem in not
getting a pdb or mtz to export for wxc optimization (see below) so I will
rerun this tonight and hopefully everything will go smoothly. Thanks
again.
-Yarrow
-
============================== Exporting results
==============================
Traceback (most recent call last):
File "/usr/local/phenix-1.6-289/phenix/phenix/command_line/refine.py",
line 11, in <module>
command_line.run(command_name="phenix.refine", args=sys.argv[1:])
File
"/usr/local/phenix-1.6-289/phenix/phenix/refinement/command_line.py",
line 97, in run
refine_object.write_refined_pdb(f_pdb)
File "/usr/local/phenix-1.6-289/phenix/phenix/refinement/driver.py",
line 903, in write_refined_pdb
print >> self.log, "Writing refined structure to PDB file:\n %s" %
f.name
File "/usr/local/phenix-1.6-289/cctbx_project/libtbx/utils.py", line
666, in write
file_object.write(str)
IOError: [Errno 5] Input/output error
> On Wed, Aug 4, 2010 at 3:37 PM, <amadrona at uci.edu> wrote:
>
>> Do you know the correct tar file for Fedora core 10?
>> When I enter "uname -r" in the command line I get:
>> 2.6.27.30-170.2.82.fc10.x86_64
>> I think this means I am running Fedora Core 10 but I don't see a .tar
>> file
>> for this to download. Will another work?
>>
>
> Usually, yes (we only very recently started building different 64-bit
> installers). I'd recommend starting with the fc8 installer.
>
> -Nat
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