[phenixbb] anomalous difference map demonstration in pymol
Pavel Afonine
PAfonine at lbl.gov
Tue Sep 29 15:59:35 PDT 2009
Hi,
start new PHENIX GUI by typing from the command line:
phenix
Then click on "Create maps" - that will allow you to compute and output
anomalous difference maps in X-plor format.
You need to use the latest version for this:
http://www.phenix-online.org/download/nightly_builds.cgi
Pavel.
On 9/29/09 3:48 PM, crystallogrphy wrote:
> Hi,
> I have used anomalous data to do refinement. The crystal diffracts to
> 3.5A. The resulting mtz file shows good anomalous density around the
> heavy atoms. Now I want to demonstrate the density in Pymol.
> Does anyone know how to generate the map use the map file in MTZ
> format in Pymol?
>
> Thanks!
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