[phenixbb] Help with custom bond restraints syntax

Ralf W. Grosse-Kunstleve rwgk at cci.lbl.gov
Tue Sep 29 09:18:24 PDT 2009


>         atom_selection_1 = Atom1
>         atom_selection_2 = Atom2

This should fix it:

         atom_selection_1 = $Atom1
         atom_selection_2 = $Atom2

>      A second question is: once I get the custom bond/angle restraints
> correctly implemented, is there a better or more convenient place to
> look and confirm that the restraints have been imposed other than the
> .geo file phenix.refine outputs?

The custom restraints will also be listed in the .log file.

Ralf



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