[phenixbb] low resolution map
Nathaniel Echols
NEchols at lbl.gov
Tue Sep 8 17:17:33 PDT 2009
On Sep 8, 2009, at 7:58 AM, Tom Terwilliger wrote:
> You should probably add a step to keep and extend your freeR flags:
>
> iotbx.r_free_flags_completion_simple exptl_fobs_freeR_flags.mtz 2.8
>
> where exptl_fobs_freeR_flags.mtz is your refinement data file from
> your previous runs of autobuild (which contains your current set of
> freeR flags). This will produce a file with JUST the extended freeR
> flags. You can then combine this extended set of freeR flags with your
> hires file most easily with the reflection tools in the current PHENIX
> GUI. Then use that hires_file in autobuild.
I didn't know about this command until today - but it is now
incorporated into the GUI reflection tools
(phenix.reflection_file_editor), so you can do this all in one step
starting with the next installer (1.4-160 and up).
-Nat
-------------------
Nathaniel Echols
Lawrence Berkeley Lab
510-486-5136
NEchols at lbl.gov
More information about the phenixbb
mailing list