[phenixbb] Chain id of water is not reading by coot

Pavel Afonine PAfonine at lbl.gov
Wed Sep 2 14:53:50 PDT 2009


Hi Raja,

I just took a random PDB file and appended the four waters you gave us 
below. In my version of COOT (which is 0.6-pre-1 revision 2076) it works 
just fine: I can see all the chains.

If you send me the whole PDB file I will have a closer look.

Pavel.


On 9/2/09 2:45 PM, Raja Dey wrote:
> Dear Friends,
>                      I have 7 chains in my pdb file. When I am reading the pdb file in COOT, for some reason the chain id(W) of water is not coming in the list. I clicked on 'draw' and then 'go to atom'. I can see all other chains but not W. I created water in PHENIX
> Is there any wrong in my pdb?
>
> HETATM 7562  O   HOH W 542      -9.043  -2.133 -12.633  1.00 34.55      W    O
> HETATM 7563  O   HOH W 543     -22.004   8.228 -21.695  1.00 34.55      W    O
> HETATM 7564  O   HOH W 544       5.926  38.977 -11.538  1.00 34.55      W    O
> HETATM 7565  O   HOH W 545     -31.162   5.813 -31.403  1.00 34.55      W    O
>
>
> Raja 
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