[phenixbb] phasine error
Pavel Afonine
PAfonine at lbl.gov
Wed Jun 10 21:18:47 PDT 2009
Hi,
you can get it using phenix.refine. Just type from the command line:
phenix.refine model.pdb data.mtz strategy=none main.number_of_macro_cycles=1
and hit Enter. Look for the numbers towards the end of log file or
output to the screen (after bulk solvent correction and scaling is
reported done).
Please let me know if you have any questions.
Pavel.
PS> It is a good question, thanks. I will add phase error and ML
coordinate error estimates to model_vs_data.
On 6/10/09 9:10 PM, vennila Natesan wrote:
> Dear members
>
> I am having solved strcutures for some five datasets of the same
> protein. All the cases autobuild
> builds ~97% of residues. I want to compare the phasing among those.
> Can we calculate the phasing
> error in the units of degrees in autosol? In all the cases, the
> Bayesian CC is between 45 and 56 and FOM
> is between 0.42 and 0.47.Is <http://0.47.Is> there any option in
> phenix to know the phasing error in degrees?
> ------------------------------------------------------------------------
>
> _______________________________________________
> phenixbb mailing list
> phenixbb at phenix-online.org
> http://www.phenix-online.org/mailman/listinfo/phenixbb
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://phenix-online.org/pipermail/phenixbb/attachments/20090610/02fe33fb/attachment-0003.htm>
More information about the phenixbb
mailing list