[phenixbb] sfcheck & Phenix
PAfonine at lbl.gov
Sat Oct 4 14:18:26 PDT 2008
I completely agree with Paul. Just to add that this difference could
also be large if you are refining against neutron data.
On 9/22/2008 9:12 PM, Paul Adams wrote:
> Hi John,
> my understanding is that SFCHECK does not reproduce the TLS or bulk
> solvent scaling. Depending on your structure this can be a huge effect
> on the R-factors.
> On Sep 22, 2008, at 8:35 PM, john kryst wrote:
>> Hi all,
>> I have a little problem... R and R-free from
>> phenix.refine are 22.9 and 30.6 respectively.... when i validated
>> in the rcsb server... sfcheck gave me a R and Rfree of 30.8 and
>> 37.8. I am aware that sfcheck never reproduces the result. but i am
>> worried that the difference is quite large... indeed i have used TLS
>> NCS and bulk solvent correction...
>> Did i do anything wrong... please help me
>> Thanks for your help
>> phenixbb mailing list
>> phenixbb at phenix-online.org
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