[phenixbb] prosthetic group
Ralf W. Grosse-Kunstleve
rwgk at cci.lbl.gov
Thu May 29 11:41:16 PDT 2008
> should prosthetic groups be attached to proteins by those LINK or CONNECT
> records as found in typical PDB files?
phenix.refine ignores LINK and CONECT records completely (many reasons).
You can use the geometry_restraint.edits to define custom bonds and
angles (see phenix.refine documentation), or define cif links and
modifications by hand.
> e-LBOW seems for _ligands_ only.
Do you have a concrete problem with elbow?
More information about the phenixbb