[phenixbb] Tell phenix.autosol to find more heavy atoms?
Francis E Reyes
Francis.Reyes at Colorado.EDU
Mon May 19 13:11:46 PDT 2008
I have a SAD map which is beautiful, but I want to look for more heavy
atoms before further refinement...
Would the proper procedure be....
SAD dataset, reading heavy-atom sites from a PDB file written by
phenix.hyss:
phenix.autosol 11 Pb data=deriv.sca seq_file=seq.dat \
sites_file=deriv_hyss_consensus_model.pdb
This will carry out the usual structure solution process, but will
read sites from deriv_hyss_consensus_model.pdb, try both hands, and
carry on from there. If you know the hand of the substructure, you can
fix it with have_hand=True.
Would there be a PDS friendly way to do this (not necessary though) ?
i.e. phenix.autobuild after_autosol
---------------------------------------------
Francis Reyes M.Sc.
215 UCB
University of Colorado at Boulder
gpg --keyserver pgp.mit.edu --recv-keys 67BA8D5D
8AE2 F2F4 90F7 9640 28BC 686F 78FD 6669 67BA 8D5D
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