[phenixbb] sugar links
Alessandro Nascimento
as_nascimento at yahoo.com.br
Thu Mar 27 08:43:09 PDT 2008
Hi all,
I'm trying to apply a cif link modification for MAN-MAN link and found
this post explaining how to do that:
http://www.phenix-online.org/pipermail/phenixbb/2007-July/000332.html
However the syntax
refinement.pdb_interpretation.apply_cif_link {
data_link = NAG-NAG-b-D
residue_selection_1 = chain A and resname NAG and resid 901
residue_selection_2 = chain A and resname ASN and resid 900
}
gives me the following error
***
apply_cif_link:
data_link: NAG-NAG-b-D
Sorry: Missing CIF link: data_link_NAG-NAG-b-D
Please check for spelling errors or specify the file name
with the link as an additional argument.
***
Has the syntax changed or am I missing something?
thanks a lot in advance,
--alessandro
phenix.refine --version:
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PHENIX: Python-based Hierarchical ENvironment for Integrated Xtallography
Version: 2008_02_08_1610
User: Alessandro
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