[phenixbb] secondary structure restraints

Ralf W. Grosse-Kunstleve rwgk at cci.lbl.gov
Mon Aug 11 10:36:48 PDT 2008


Hi Nikos,

The best we have at the minute is described under the

  Definition of custom bonds and angles

in the phenix.refine documentation

  http://www.phenix-online.org/download/cci_apps/
    -> phenix.refine  [Documentation]

Note that the "slack" parameter may be useful to handle hydrogen bonds.
If you have many restraints, it will be cumbersome to define all
the custom bonds. Sorry, we'll provide something more elegant in
the future.

Ralf



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