[phenixbb] dihedral error
folmerf at gmail.com
Thu Aug 7 08:01:00 PDT 2008
2008/8/7 Simon Kolstoe <s.kolstoe at ucl.ac.uk>:
> phenix.refine keeps on stopping with the error:
> AssertionError: Conflicting dihedral restraints:
> tor id: var_002
> 1. definition from: residue: DRG, conformer A
> 2. definition from: residue: DRG, conformer A
> " CB DRG A 500 "
> " OG1 DRG A 500 "
> " PAL DRG A 500 "
> " OAF DRG A 500 "
> It is for a phospho-threonine residue whose dictionary I made in
> PRODRG. I've tried all the different charge states of the phosphate
> however phenix gives the same error every time. Any ideas?
I guess you could try and use the naming from a phospho-threonine residue?
try having a look at HIC-Up, a phosphothreonine is tpo
to start a search
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