[phenixbb] phenix.refine: Override 'Number of bonds with excessive lengths'
Martin.Laurberg
martin at biology.ucsc.edu
Mon Aug 4 11:00:29 PDT 2008
Dear All,
Is there a way to override the phenix.refine Setup Restraints Manager,
preventing phenix.refine from terminating if the model features a lot
of excessive bond lenghts?
Thanks,
/Martin
========================== Set up restraints manager
==========================
....
Bonds with excessive lengths:
Distance model: 50.2364 (ideal: 1.525)
ATOM 1336 C3' DC B 20 12.611 28.560 12.463 1.00 42.81
C
ATOM 1338 C2' DC B 20 -11.801 15.989 54.531 1.00 42.03
C
....
Sorry: Number of bonds with excessive lengths: 71
--
Martin Laurberg, PhD
Noller Laboratory
225 Sinsheimer Laboratories
University of California at Santa Cruz
CA-95064 Santa Cruz
USA
Tel +1 (831) 459 35 84
Fax +1 (831) 459 37 37
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